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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs146987821 chr18:37023777 C/T PRHOXNB chr13:28552243-28562774:- 0.71 9.29 1.25E-12 Box Plot
ACC rs147059934 chr18:36986629 C/T PRHOXNB chr13:28552243-28562774:- 0.61 7.99 1.34E-10 Box Plot
ACC rs147377754 chr2:224184483 A/G PRHOXNB chr13:28552243-28562774:- 0.59 7.99 1.3E-10 Box Plot
ACC rs1474526 chr10:124205644 C/T AKIRIN1 chr1:39456895-39471731:+ 1.74 8.33 3.91E-11 Box Plot
ACC rs147622719 chr6:62294785 AT/A PRHOXNB chr13:28552243-28562774:- 0.59 7.82 2.45E-10 Box Plot
ACC rs1478196 chr15:54156113 G/A PRHOXNB chr13:28552243-28562774:- 0.61 7.75 3.22E-10 Box Plot
ACC rs147840306 chr3:167730046 C/T PRHOXNB chr13:28552243-28562774:- 0.6 7.52 7.35E-10 Box Plot
ACC rs1478937 chr9:5930978 G/A DSC1 chr18:28709199-28742819:- -0.91 -8.7 1.01E-11 Box Plot
ACC rs1478938 chr9:5931216 C/T DSC1 chr18:28709199-28742819:- -0.91 -8.7 1.01E-11 Box Plot
ACC rs148061762 chr18:37255475 T/TA PRHOXNB chr13:28552243-28562774:- 0.74 9.57 4.56E-13 Box Plot
ACC rs148402854 chr7:47201794 A/T DRGX chr10:50572226-50604062:- 0.81 8.05 1.07E-10 Box Plot
ACC rs1484215 chr15:74640109 C/T PRHOXNB chr13:28552243-28562774:- 0.6 7.87 2.03E-10 Box Plot
ACC rs148428617 chr8:54309669 T/C PRHOXNB chr13:28552243-28562774:- 0.59 7.73 3.45E-10 Box Plot
ACC rs148430220 chr2:8696046 T/C CACNG5 chr17:64831235-64881603:+ 1.13 7.7 3.78E-10 Box Plot
ACC rs148866614 chr14:55561182 C/CTTGTTTGT DDX53 chrX:23018078-23021706:+ 1.08 7.6 5.57E-10 Box Plot